Skip to content
SimLab Science
Explore Our Courses

The Research Lab That Fits in Your Browser.

Master molecular dynamics simulations through structured lectures, detailed reading, live cloud laboratories with supercomputers/HPC, and cohort-based learning.

week03-energy-minimization

$ gmx grompp -f minim.mdp -c system.gro -p topol.top -o em.tpr

Generating 1-4 interactions: fudge = 1

This run will generate roughly 2 Mb of data

$ gmx mdrun -deffnm em -nb gpu

Steepest Descents converged to Fmax < 1000 in 342 steps

Week 4 of 6

Equilibration

Live lab in 2 days

Live Cloud Laboratories

Click Launch Lab. Your research environment appears in the browser.

Each student launches their own private, browser-based laboratory during scheduled live sessions - a full GROMACS and JupyterLab environment with course files pre-loaded, CPU limits enforced, and your work automatically preserved. You never touch cloud provider credentials, billing, or infrastructure.

1Checking Access
2Preparing Your Laboratory
3Loading Course Files
4Lab Ready
Questions

Frequently asked questions

Do I need my own supercomputer?

No. You never need a supercomputer or anything fancy. Your laboratory environment is provisioned and managed entirely by SimLab Academy - we give you access to everything you need.

Are cohorts really free?

Yes. Cohorts are free and application-based, with a limited number of seats each round.

What if I've never used Linux or GROMACS before?

That's expected. Week 1 teaches Linux fundamentals from the ground up - no prior command-line experience is assumed.

What happens if a cohort fills up?

Once every seat is confirmed, the cohort is marked full and applicants who were not accepted are automatically emailed the moment a new cohort opens.

Limited seats. Small cohorts. A real research workflow.

Explore Our Courses